PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012574061.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 429aa    MW: 47995.2 Da    PI: 6.7886
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012574061.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.22.6e-07342382954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++++P        K++ a++L +A +Y+k L
  XP_012574061.1 342 ARHRRERISEKIRVLQKIVPGG-----SKMDTASMLDEAANYLKFL 382
                     599*****************95.....5****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.17333382IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-11338391IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.76E-9339387No hitNo description
SMARTSM003533.9E-12339388IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.27E-13339392IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-4343382IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MEGLNWNGSE ILESTPILWS THHQEQNMEG DYSSISKSHI HQIQEMDQKV QTSHTVMMPN  60
TNFSQHAAAA ALTTMTVKSG EAAVSSWKKE PLILQSFQSS SVNKPYNSST ITTTSTNYMP  120
DFNMAHQQQK QLIKSGCSFD CLISASTNSN TDTTSIEDDD GISNIFSDCR RRNLWNFSYA  180
TTASNSSAET DHSNVSNGTN YKNKDMQCNK LNELDETMSQ TSSDQLQSKA SDHHFFSTVQ  240
NSVSVENGFG IFSDKPPKCK KPRWEKGPFS SNINFQQPKS STTCCSSSSN EETDPEAVAA  300
MKEMMYRAAA FRPVNFGMEN DVIEKPKRKN VKISNDPQTV AARHRRERIS EKIRVLQKIV  360
PGGSKMDTAS MLDEAANYLK FLRSQVKALE SLGNKVNAMD CPSTSIAFSF NPSFHMQIHP  420
SDHNNHDYY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012574060.10.0PREDICTED: transcription factor bHLH87-like isoform X2
SwissprotQ8S3D27e-73BH087_ARATH; Transcription factor bHLH87
TrEMBLA0A072TLG81e-162A0A072TLG8_MEDTR; Transcription factor
STRINGGLYMA07G01611.11e-139(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.14e-62bHLH family protein